BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032A06SP1|AL429499
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1485 1768 0.0
>3x_Contig1485
Length = 9830
Score = 1768 bits (892), Expect = 0.0
Identities = 892/892 (100%)
Strand = Plus / Minus
Query: 5 cattcttcttcctgttctgctgctaattctaatctaatcttatcaaagaatgacgccata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1369 cattcttcttcctgttctgctgctaattctaatctaatcttatcaaagaatgacgccata 1310
Query: 65 caaaaaaaacaaacagaaatataacacgctttaaccaattttcgatcccgtatcaatcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1309 caaaaaaaacaaacagaaatataacacgctttaaccaattttcgatcccgtatcaatcct 1250
Query: 125 atcactatcactatcatatcatgttattgcaaattacaccgttcctgccgaattccgttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 atcactatcactatcatatcatgttattgcaaattacaccgttcctgccgaattccgttt 1190
Query: 185 ccatttctctaccccaactaccatatgcaagtagttgtatttcgcccttgtttacagccg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 ccatttctctaccccaactaccatatgcaagtagttgtatttcgcccttgtttacagccg 1130
Query: 245 ttttgcctgcaaactgcttcaacaaaacattcctcgagcctcattgatcgcgtttttcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 ttttgcctgcaaactgcttcaacaaaacattcctcgagcctcattgatcgcgtttttcct 1070
Query: 305 ttcttttctttttgtcccttagttaaggtttgtatctaacactcgtctttcggatctttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 ttcttttctttttgtcccttagttaaggtttgtatctaacactcgtctttcggatctttt 1010
Query: 365 aggagtgtcttttccgaataaggaaggacgtccccgaatcatcaccgaggattactcgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 aggagtgtcttttccgaataaggaaggacgtccccgaatcatcaccgaggattactcgtg 950
Query: 425 actcggtattgtgactatcaaagggtccaggagatagattgaaggaagttgagattaatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 actcggtattgtgactatcaaagggtccaggagatagattgaaggaagttgagattaatc 890
Query: 485 aagggggtcttggtacagagatgtggtatctgctgctctgcccttgccgaaagatattgc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 aagggggtcttggtacagagatgtggtatctgctgctctgcccttgccgaaagatattgc 830
Query: 545 accctatcttagatagtcaattttttgggcttatcacaccgaatggtggtaaaatataac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 accctatcttagatagtcaattttttgggcttatcacaccgaatggtggtaaaatataac 770
Query: 605 ggttaaatgatattataaatagtgttatgtacgcgtctgtgcgcttatataaccatcaag 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 ggttaaatgatattataaatagtgttatgtacgcgtctgtgcgcttatataaccatcaag 710
Query: 665 cgacctgacgatctttgataaaagacaaaggacacaggacaatgagtgtcgcgtacgtgc 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 cgacctgacgatctttgataaaagacaaaggacacaggacaatgagtgtcgcgtacgtgc 650
Query: 725 tttatgtcttcttgttcagttcatcgaactggtagctcctagctacacccgcagtaccct 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tttatgtcttcttgttcagttcatcgaactggtagctcctagctacacccgcagtaccct 590
Query: 785 cttccacagtagcaccgtcttcttctccgtcttcgtcatctttgtagtcacttcctagac 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 cttccacagtagcaccgtcttcttctccgtcttcgtcatctttgtagtcacttcctagac 530
Query: 845 ctgtccaatgtcgggtttgcaagaatgctgccgatgtagagacggtgttcct 896
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ctgtccaatgtcgggtttgcaagaatgctgccgatgtagagacggtgttcct 478
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6556
Number of Sequences: 1807
Number of extensions: 6556
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)